guide rna targeting exon 3 Search Results


90
Benchling Inc sg rna sequences targeting upstream downstream slc35a2 exon 3
Emx1‐Cre‐mediated <t>Slc35a2</t> conditional knockout (cKO) mice have developmental delays and impaired growth and survival. (A) Emx1‐ Cre mice were crossed with Slc35a2 floxed mice to produce forebrain‐specific loss of SLC35A2 from excitatory neurons and glia (blue). Cx, cortex; Hp, hippocampus; OB, olfactory bulb. (B) Slc35a2 gene expression measured by real‐time quantitative polymerase chain reaction was significantly reduced in the cortices of cKO mice compared to floxed controls ( n = 4 per group; one‐way analysis of variance [ANOVA], F 3,12 = 21.16, p < .0001, Bonferroni post hoc comparisons shown). (C) SLC35A2 protein expression measured by Western blot was significantly reduced in the cortices of cKO male mice compared to floxed male controls ( n = 3–4 per group; one‐way ANOVA, F 3,11 = 4.228, p < .05, Bonferroni post hoc comparisons shown). (D, E) Male cKO mice were smaller (D) and had significantly reduced body weight (E) beginning at postnatal day 9 ( n = 7–24 mice per group; mixed‐effect model [genotype × time] with Tukey post hoc comparisons, p < .05). (F) Both male and female cKO mice had reduced survival compared to floxed controls ( p < .0001), and hemizygous males had reduced survival compared to heterozygous females ( p < .0001; n = 32–88 per group; Kaplan–Meier survival differences evaluated by the log‐rank test). (G–J) Neonatal cKO mice exhibited developmental delays including delayed eye opening (G), delayed ear twitch flattening reflex (H), delayed auditory startle reflex (I), and abnormal hind limb clasping reflex (J; n = 6–23 per group; two‐tailed t ‐test). * p < .05, ** p < .01, **** p < .0001. Data are shown as mean ± SEM.
Sg Rna Sequences Targeting Upstream Downstream Slc35a2 Exon 3, supplied by Benchling Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/sg rna sequences targeting upstream downstream slc35a2 exon 3/product/Benchling Inc
Average 90 stars, based on 1 article reviews
sg rna sequences targeting upstream downstream slc35a2 exon 3 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

Image Search Results


Emx1‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice have developmental delays and impaired growth and survival. (A) Emx1‐ Cre mice were crossed with Slc35a2 floxed mice to produce forebrain‐specific loss of SLC35A2 from excitatory neurons and glia (blue). Cx, cortex; Hp, hippocampus; OB, olfactory bulb. (B) Slc35a2 gene expression measured by real‐time quantitative polymerase chain reaction was significantly reduced in the cortices of cKO mice compared to floxed controls ( n = 4 per group; one‐way analysis of variance [ANOVA], F 3,12 = 21.16, p < .0001, Bonferroni post hoc comparisons shown). (C) SLC35A2 protein expression measured by Western blot was significantly reduced in the cortices of cKO male mice compared to floxed male controls ( n = 3–4 per group; one‐way ANOVA, F 3,11 = 4.228, p < .05, Bonferroni post hoc comparisons shown). (D, E) Male cKO mice were smaller (D) and had significantly reduced body weight (E) beginning at postnatal day 9 ( n = 7–24 mice per group; mixed‐effect model [genotype × time] with Tukey post hoc comparisons, p < .05). (F) Both male and female cKO mice had reduced survival compared to floxed controls ( p < .0001), and hemizygous males had reduced survival compared to heterozygous females ( p < .0001; n = 32–88 per group; Kaplan–Meier survival differences evaluated by the log‐rank test). (G–J) Neonatal cKO mice exhibited developmental delays including delayed eye opening (G), delayed ear twitch flattening reflex (H), delayed auditory startle reflex (I), and abnormal hind limb clasping reflex (J; n = 6–23 per group; two‐tailed t ‐test). * p < .05, ** p < .01, **** p < .0001. Data are shown as mean ± SEM.

Journal: Epilepsia

Article Title: Mouse models of Slc35a2 brain mosaicism reveal mechanisms of mild malformations of cortical development with oligodendroglial hyperplasia in epilepsy

doi: 10.1111/epi.18166

Figure Lengend Snippet: Emx1‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice have developmental delays and impaired growth and survival. (A) Emx1‐ Cre mice were crossed with Slc35a2 floxed mice to produce forebrain‐specific loss of SLC35A2 from excitatory neurons and glia (blue). Cx, cortex; Hp, hippocampus; OB, olfactory bulb. (B) Slc35a2 gene expression measured by real‐time quantitative polymerase chain reaction was significantly reduced in the cortices of cKO mice compared to floxed controls ( n = 4 per group; one‐way analysis of variance [ANOVA], F 3,12 = 21.16, p < .0001, Bonferroni post hoc comparisons shown). (C) SLC35A2 protein expression measured by Western blot was significantly reduced in the cortices of cKO male mice compared to floxed male controls ( n = 3–4 per group; one‐way ANOVA, F 3,11 = 4.228, p < .05, Bonferroni post hoc comparisons shown). (D, E) Male cKO mice were smaller (D) and had significantly reduced body weight (E) beginning at postnatal day 9 ( n = 7–24 mice per group; mixed‐effect model [genotype × time] with Tukey post hoc comparisons, p < .05). (F) Both male and female cKO mice had reduced survival compared to floxed controls ( p < .0001), and hemizygous males had reduced survival compared to heterozygous females ( p < .0001; n = 32–88 per group; Kaplan–Meier survival differences evaluated by the log‐rank test). (G–J) Neonatal cKO mice exhibited developmental delays including delayed eye opening (G), delayed ear twitch flattening reflex (H), delayed auditory startle reflex (I), and abnormal hind limb clasping reflex (J; n = 6–23 per group; two‐tailed t ‐test). * p < .05, ** p < .01, **** p < .0001. Data are shown as mean ± SEM.

Article Snippet: Briefly, single guide (sg) RNA sequences targeting upstream and downstream of Slc35a2 exon 3 were designed using the Benchling design tool ( www.benchling.com ).

Techniques: Knock-Out, Expressing, Real-time Polymerase Chain Reaction, Western Blot, Two Tailed Test

Cortical architecture and oligodendroglial cell density in Emx1‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice. (A) Representative images of coronal sections through the postnatal day 8 brain stained with 4,6‐diamidino‐2‐phenylindole (DAPI). Lines indicate measurements of cortex (ctx) thickness and corpus callosum (cc) thickness. (B) Both female and male cKO mice had reduced cortex thickness (one‐way analysis of variance [ANOVA] with Bonferroni post hoc comparisons, F 3,16 = 31.51, p < .0001; post hoc p < .001 in females and p < .0001 in males). (C) No differences in corpus callosum thickness were observed. (D–F) Representative images of coronal sections through the cortex stained with layer markers BRN2 (layers II/III), SATB2 (layers II–IV), and CTIP2 (layers V/VI). Cortex was divided into six equal bins from the ventricle to cortical surface to analyze distribution of positive immunofluorescent area. (G) BRN2 staining was more widely distributed in female and male cKO mice compared to floxed controls, with significantly decreased BRN2 positivity in bin 1 of both sexes and increased BRN2 staining found in bin 2 ( n = 3–4 per group, 2–3 sections per brain; two‐way ANOVA with Bonferroni post hoc comparisons; interaction of genotype × cortical layer, F 15,96 = 12.55, p < .0001; post hoc comparisons shown). (H) SATB2 staining was reduced in male cKO mice compared to floxed controls in bin 2 and bin 3 ( n = 3–4 per group, 2–3 sections per brain; two‐way ANOVA with Bonferroni post hoc comparisons; effect of genotype, F 3,90 = 3.618, p < .05; post hoc comparisons shown). (I) No significant differences were observed in CTIP2 staining across cortical bins. (J) OLIG2 immunoreactivity was quantified in an region of interest containing the cortex–white matter junction (blue box). (K) OLIG2‐positive cell density was significantly increased in the cortex–white matter junction of male and female cKO mice compared to floxed controls ( n = 3–4 per group, 2–3 sections per brain; two‐tailed t ‐tests, p < .05). Data are shown as mean ± SEM. * p < .05, *** p < .001, **** p < .0001.

Journal: Epilepsia

Article Title: Mouse models of Slc35a2 brain mosaicism reveal mechanisms of mild malformations of cortical development with oligodendroglial hyperplasia in epilepsy

doi: 10.1111/epi.18166

Figure Lengend Snippet: Cortical architecture and oligodendroglial cell density in Emx1‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice. (A) Representative images of coronal sections through the postnatal day 8 brain stained with 4,6‐diamidino‐2‐phenylindole (DAPI). Lines indicate measurements of cortex (ctx) thickness and corpus callosum (cc) thickness. (B) Both female and male cKO mice had reduced cortex thickness (one‐way analysis of variance [ANOVA] with Bonferroni post hoc comparisons, F 3,16 = 31.51, p < .0001; post hoc p < .001 in females and p < .0001 in males). (C) No differences in corpus callosum thickness were observed. (D–F) Representative images of coronal sections through the cortex stained with layer markers BRN2 (layers II/III), SATB2 (layers II–IV), and CTIP2 (layers V/VI). Cortex was divided into six equal bins from the ventricle to cortical surface to analyze distribution of positive immunofluorescent area. (G) BRN2 staining was more widely distributed in female and male cKO mice compared to floxed controls, with significantly decreased BRN2 positivity in bin 1 of both sexes and increased BRN2 staining found in bin 2 ( n = 3–4 per group, 2–3 sections per brain; two‐way ANOVA with Bonferroni post hoc comparisons; interaction of genotype × cortical layer, F 15,96 = 12.55, p < .0001; post hoc comparisons shown). (H) SATB2 staining was reduced in male cKO mice compared to floxed controls in bin 2 and bin 3 ( n = 3–4 per group, 2–3 sections per brain; two‐way ANOVA with Bonferroni post hoc comparisons; effect of genotype, F 3,90 = 3.618, p < .05; post hoc comparisons shown). (I) No significant differences were observed in CTIP2 staining across cortical bins. (J) OLIG2 immunoreactivity was quantified in an region of interest containing the cortex–white matter junction (blue box). (K) OLIG2‐positive cell density was significantly increased in the cortex–white matter junction of male and female cKO mice compared to floxed controls ( n = 3–4 per group, 2–3 sections per brain; two‐tailed t ‐tests, p < .05). Data are shown as mean ± SEM. * p < .05, *** p < .001, **** p < .0001.

Article Snippet: Briefly, single guide (sg) RNA sequences targeting upstream and downstream of Slc35a2 exon 3 were designed using the Benchling design tool ( www.benchling.com ).

Techniques: Knock-Out, Staining, Two Tailed Test

Neuronal migration is delayed in Emx1‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice. (A) To determine whether a defect in neuronal migration was responsible for the changes in cortical layering observed within the cortex, newborn neurons destined for layer II/III were labeled by EdU injection at embryonic day 15.5 (E15.5) and brains were subsequently examined at postnatal day 1 (P1) or P8. (B, C) EdU signal was more prevalent in the white matter (WM) and ventricular zone (VZ) compared to cortex in cKO mice at P1, whereas most signal was found in the outer cortex in floxed control mice ( n = 3 per group, 2–3 sections per brain; two‐way analysis of variance [ANOVA] with Bonferroni post hoc tests; interaction of genotype × cortical layer, F 6,24 = 64.99, p < .0001; post hoc comparisons shown). (D, E) By P8, EdU signal was concentrated in the outer cortex in both floxed control and cKO mice, indicating a delay in neuronal migration ( n = 3 mice per group, 2–4 sections per brain; two‐way ANOVA with Bonferroni post hoc tests, no significance). Data are shown as mean ± SEM. * p < .05, *** p < .001, **** p < .0001. DAPI, 4,6‐diamidino‐2‐phenylindole.

Journal: Epilepsia

Article Title: Mouse models of Slc35a2 brain mosaicism reveal mechanisms of mild malformations of cortical development with oligodendroglial hyperplasia in epilepsy

doi: 10.1111/epi.18166

Figure Lengend Snippet: Neuronal migration is delayed in Emx1‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice. (A) To determine whether a defect in neuronal migration was responsible for the changes in cortical layering observed within the cortex, newborn neurons destined for layer II/III were labeled by EdU injection at embryonic day 15.5 (E15.5) and brains were subsequently examined at postnatal day 1 (P1) or P8. (B, C) EdU signal was more prevalent in the white matter (WM) and ventricular zone (VZ) compared to cortex in cKO mice at P1, whereas most signal was found in the outer cortex in floxed control mice ( n = 3 per group, 2–3 sections per brain; two‐way analysis of variance [ANOVA] with Bonferroni post hoc tests; interaction of genotype × cortical layer, F 6,24 = 64.99, p < .0001; post hoc comparisons shown). (D, E) By P8, EdU signal was concentrated in the outer cortex in both floxed control and cKO mice, indicating a delay in neuronal migration ( n = 3 mice per group, 2–4 sections per brain; two‐way ANOVA with Bonferroni post hoc tests, no significance). Data are shown as mean ± SEM. * p < .05, *** p < .001, **** p < .0001. DAPI, 4,6‐diamidino‐2‐phenylindole.

Article Snippet: Briefly, single guide (sg) RNA sequences targeting upstream and downstream of Slc35a2 exon 3 were designed using the Benchling design tool ( www.benchling.com ).

Techniques: Migration, Knock-Out, Labeling, Injection, Control

Emx1‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice exhibit spontaneous seizure activity. (A) Representative electroencephalographic (EEG) traces over 5 min of recording from floxed control and Emx1‐Cre‐mediated Slc35a2 cKO mice between 15 and 25 weeks of age. cKO mice exhibited spontaneous bursts of electrographic activity correlating with behavioral abnormalities (highlighted by black bars) and abnormal interictal spike discharges. (B) Highlighted regions of EEG activity are shown in more detail. Emx1‐Cre‐mediated Slc35a2 cKO mice demonstrated rhythmic ictal spiking with clear onset and offset. (C) An average of 26 electrographically confirmed seizures were observed in cKO mice during the 72‐h video‐EEG recordings compared to none in the floxed controls (Mann–Whitney test, * p < .05). (D) These events coincided with behavioral signs of seizure, including leg/head jerking (score = 2–3) and clonic activity (e.g., falling to the side; score = 4–5; Mann–Whitney test, ** p < .01). Male and female mice are pooled. Data shown are as mean ± SEM.

Journal: Epilepsia

Article Title: Mouse models of Slc35a2 brain mosaicism reveal mechanisms of mild malformations of cortical development with oligodendroglial hyperplasia in epilepsy

doi: 10.1111/epi.18166

Figure Lengend Snippet: Emx1‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice exhibit spontaneous seizure activity. (A) Representative electroencephalographic (EEG) traces over 5 min of recording from floxed control and Emx1‐Cre‐mediated Slc35a2 cKO mice between 15 and 25 weeks of age. cKO mice exhibited spontaneous bursts of electrographic activity correlating with behavioral abnormalities (highlighted by black bars) and abnormal interictal spike discharges. (B) Highlighted regions of EEG activity are shown in more detail. Emx1‐Cre‐mediated Slc35a2 cKO mice demonstrated rhythmic ictal spiking with clear onset and offset. (C) An average of 26 electrographically confirmed seizures were observed in cKO mice during the 72‐h video‐EEG recordings compared to none in the floxed controls (Mann–Whitney test, * p < .05). (D) These events coincided with behavioral signs of seizure, including leg/head jerking (score = 2–3) and clonic activity (e.g., falling to the side; score = 4–5; Mann–Whitney test, ** p < .01). Male and female mice are pooled. Data shown are as mean ± SEM.

Article Snippet: Briefly, single guide (sg) RNA sequences targeting upstream and downstream of Slc35a2 exon 3 were designed using the Benchling design tool ( www.benchling.com ).

Techniques: Knock-Out, Activity Assay, Control, MANN-WHITNEY

Olig2‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice reveal contributions of oligodendrocytes to abnormal electroencephalographic (EEG) activity. (A) Olig2‐Cre mice were crossed with Slc35a2 floxed mice to delete SLC35A2 from oligodendrocytes. (B) Olig2‐Cre‐mediated Slc35a2 cKO mice had reduced body mass compared to floxed controls ( n = 7–15 mice per group; one‐way analysis of variance with Tukey multiple comparisons; effect of genotype, F 3,814 = 170.2, p < .0001, post hoc p < .05 in +/y vs. −/y males day 7–21, +/+ vs. −/+ females day 11–21, −/+ females vs. −/y males day 13–15 and day 19–21). (C) Olig2‐Cre‐mediated Slc35a2 cKO males, but not females, had significantly reduced survival. Kaplan–Meier survival differences were evaluated by the log‐rank test ( p < .01). (D) OLIG2 immunoreactivity was quantified in the cortex–white matter junction (blue box). (E) OLIG2‐positive cell density was significantly increased in the cortex–white matter junction of male cKO mice ( n = 3–5 per group, 2–4 sections per brain; two‐tailed t ‐tests, p < .05). (F) Representative EEG traces over 5 min of recording from floxed control and Olig2‐Cre‐mediated Slc35a2 cKO mice between 15 and 25 weeks of age. The same floxed control mice were used for both Figure and Figure comparisons, replotted here for direct comparison. cKO mice exhibit spontaneous bursts of >10 s. Ictal spiking activity correlating with behavioral abnormalities (highlighted by black bars) and abnormal spike discharges are shown. (G) Highlighted regions of EEG activity are shown in more detail. Olig2‐Cre‐mediated Slc35a2 cKOs exhibited bursts of irregular spikes. (H) An average of 13 ictal discharges were observed over the 72‐h recording period in Olig2‐Cre‐mediated Slc35a2 cKO mice (Mann–Whitney test, p < .05). (I) Behavioral correlates of these events corresponded to mild twitching or jerking (score = 2–3; Mann–Whitney test, p < .05). Male and female mice are pooled. Data are shown as mean ± SEM. * p < .05.

Journal: Epilepsia

Article Title: Mouse models of Slc35a2 brain mosaicism reveal mechanisms of mild malformations of cortical development with oligodendroglial hyperplasia in epilepsy

doi: 10.1111/epi.18166

Figure Lengend Snippet: Olig2‐Cre‐mediated Slc35a2 conditional knockout (cKO) mice reveal contributions of oligodendrocytes to abnormal electroencephalographic (EEG) activity. (A) Olig2‐Cre mice were crossed with Slc35a2 floxed mice to delete SLC35A2 from oligodendrocytes. (B) Olig2‐Cre‐mediated Slc35a2 cKO mice had reduced body mass compared to floxed controls ( n = 7–15 mice per group; one‐way analysis of variance with Tukey multiple comparisons; effect of genotype, F 3,814 = 170.2, p < .0001, post hoc p < .05 in +/y vs. −/y males day 7–21, +/+ vs. −/+ females day 11–21, −/+ females vs. −/y males day 13–15 and day 19–21). (C) Olig2‐Cre‐mediated Slc35a2 cKO males, but not females, had significantly reduced survival. Kaplan–Meier survival differences were evaluated by the log‐rank test ( p < .01). (D) OLIG2 immunoreactivity was quantified in the cortex–white matter junction (blue box). (E) OLIG2‐positive cell density was significantly increased in the cortex–white matter junction of male cKO mice ( n = 3–5 per group, 2–4 sections per brain; two‐tailed t ‐tests, p < .05). (F) Representative EEG traces over 5 min of recording from floxed control and Olig2‐Cre‐mediated Slc35a2 cKO mice between 15 and 25 weeks of age. The same floxed control mice were used for both Figure and Figure comparisons, replotted here for direct comparison. cKO mice exhibit spontaneous bursts of >10 s. Ictal spiking activity correlating with behavioral abnormalities (highlighted by black bars) and abnormal spike discharges are shown. (G) Highlighted regions of EEG activity are shown in more detail. Olig2‐Cre‐mediated Slc35a2 cKOs exhibited bursts of irregular spikes. (H) An average of 13 ictal discharges were observed over the 72‐h recording period in Olig2‐Cre‐mediated Slc35a2 cKO mice (Mann–Whitney test, p < .05). (I) Behavioral correlates of these events corresponded to mild twitching or jerking (score = 2–3; Mann–Whitney test, p < .05). Male and female mice are pooled. Data are shown as mean ± SEM. * p < .05.

Article Snippet: Briefly, single guide (sg) RNA sequences targeting upstream and downstream of Slc35a2 exon 3 were designed using the Benchling design tool ( www.benchling.com ).

Techniques: Knock-Out, Activity Assay, Two Tailed Test, Control, Comparison, MANN-WHITNEY